This function can update two parts of the mash data. The first one is setting the reference group, so the mash data can be used for commonbaseline analysis. The other one is updating the null correlation matrix.
mash_update_data(mashdata, ref = NULL, V = NULL)mash data object ontaining the Bhat matrix,
standard errors, V; created using mash_set_data
the reference group. It could be a number between 1,..., R, R is number of conditions, or the name of reference group. If there is no reference group, it can be the string 'mean'.
an R by R matrix / [R x R x N] array of correlation matrix of error correlations
a updated mash data object
simdata = simple_sims(50,5,1)
data = mash_set_data(simdata$Bhat, simdata$Shat)
mash_update_data(data, 'mean')
#> $Bhat
#> condition_1-mean condition_2-mean condition_3-mean condition_4-mean
#> effect_1 1.16629112 -0.502379393 -1.11867970 -0.246822147
#> effect_2 0.37890373 0.242329714 0.21855071 -0.014682579
#> effect_3 -0.32162549 -1.758069262 1.08564385 -0.495873238
#> effect_4 0.12253457 -0.312513634 1.13753921 -0.187651350
#> effect_5 0.15661092 -0.105296448 -0.45995382 -0.874304974
#> effect_6 -0.32869100 0.563302509 0.97937479 0.654231634
#> effect_7 -1.43742195 0.831700423 0.22234093 -0.663371912
#> effect_8 0.21238480 -0.309840349 0.87817178 -0.696442219
#> effect_9 0.79187957 0.329132135 0.87733519 -1.079033769
#> effect_10 0.42665355 0.012676442 -0.19813016 0.154279835
#> effect_11 -0.63816945 -0.661960674 1.29036130 0.008159877
#> effect_12 0.36886058 0.722099676 -0.07669161 -0.220808187
#> effect_13 -0.47400112 0.627029094 0.22194956 -0.094320495
#> effect_14 -1.47505789 2.364686492 -0.97110415 -0.459488695
#> effect_15 0.94838706 -0.097187232 0.42465613 -0.540771945
#> effect_16 1.09549296 -0.934828269 -1.02412610 2.890417998
#> effect_17 -0.71647250 0.857099224 -0.47345624 -0.360446532
#> effect_18 0.91177398 -1.340231387 -1.02523396 1.398284708
#> effect_19 -1.64308219 1.621683927 0.54670900 -0.011065379
#> effect_20 1.54166648 -0.013961481 -0.12409735 -0.071142112
#> effect_21 0.18681211 -0.777490070 -0.04772111 0.368961575
#> effect_22 -1.49822266 0.106856097 0.57188254 -0.142065650
#> effect_23 1.24204204 0.703433187 -0.73945892 0.055862248
#> effect_24 -0.64998962 -0.029456694 0.58111957 0.140841801
#> effect_25 -1.38964770 -0.430175897 0.14067692 1.352452194
#> effect_26 0.24296652 -0.810498399 1.31269291 0.113012425
#> effect_27 -1.23530402 0.479749638 0.81926654 0.768980154
#> effect_28 0.03563576 -0.828209010 -0.31961487 0.586306400
#> effect_29 -0.57849438 0.212199885 0.41918291 0.244078559
#> effect_30 0.91326621 0.398016727 -2.65995005 1.067522310
#> effect_31 0.07267138 -0.500858335 1.61079401 0.368088651
#> effect_32 -1.14769485 -1.244831947 -0.53237279 0.785009270
#> effect_33 -0.51470594 1.246725072 1.42273716 -1.875913044
#> effect_34 -1.73806427 0.618811501 -1.24027599 1.401602811
#> effect_35 -1.19929830 1.217839815 1.26002805 -2.060666208
#> effect_36 1.00012011 -0.795030012 0.13490456 0.748962850
#> effect_37 -0.25132360 1.074899535 -0.27868534 -0.796710884
#> effect_38 0.77428476 -0.466388234 -0.89384168 0.442585094
#> effect_39 0.88384643 -0.724221009 0.60427212 -1.088533588
#> effect_40 -0.11716359 -0.077190583 0.29455869 1.066387774
#> effect_41 -0.12827447 0.752434446 0.22051659 0.602097747
#> effect_42 -0.25795329 -0.388875391 0.78821629 -0.126641727
#> effect_43 -0.49502958 0.282183198 0.83636474 -0.656370984
#> effect_44 -0.50856778 1.106115923 1.12091247 -0.703480285
#> effect_45 0.09631091 0.136838482 -1.00411187 -0.773071518
#> effect_46 0.16484785 1.111028895 -0.40078177 0.346319462
#> effect_47 0.15521587 -1.269834645 -0.30609360 -0.148599730
#> effect_48 -0.21060018 -0.173787097 0.78298988 -0.170548554
#> effect_49 -0.74485090 2.740885834 -1.33603543 -0.457732386
#> effect_50 0.15581482 -0.303339218 0.40581243 -0.025811641
#> effect_51 1.60125259 -1.076147355 0.62523909 -0.037188178
#> effect_52 2.20111949 -0.896546770 -1.73678055 -0.437546418
#> effect_53 1.17452134 -0.027315708 0.70103363 -2.118255020
#> effect_54 -2.14026306 0.117648059 0.95378209 0.871263552
#> effect_55 1.26722865 -1.087789707 -2.31841156 1.831928719
#> effect_56 -2.15659438 -2.816898268 1.17617573 1.500285611
#> effect_57 -1.88806718 1.446246310 -0.52811551 1.211428152
#> effect_58 0.96995400 0.353974199 1.36771198 -2.585154941
#> effect_59 -0.64870890 1.097375856 -1.05303233 1.192250597
#> effect_60 -0.42882732 -0.612147409 0.64002379 0.011296828
#> effect_61 -2.32092129 1.110242434 2.14905628 0.687344139
#> effect_62 -0.80257710 0.115094906 -0.83070324 0.601858138
#> effect_63 -1.04094529 1.064256421 -0.63405261 0.405218820
#> effect_64 0.48243570 0.654707508 1.90322441 -0.854438144
#> effect_65 1.89346983 -1.248058073 -0.31613438 -2.182405628
#> effect_66 -1.68695626 -0.971812431 2.29437932 0.913138765
#> effect_67 -1.06168102 -0.008127938 -0.35780071 0.501475866
#> effect_68 0.30190069 -0.493923928 0.99604266 -0.995873582
#> effect_69 0.60597284 0.705708902 -0.94570370 -0.344653056
#> effect_70 0.13850178 -0.307606807 0.20276913 -0.107239882
#> effect_71 -1.82001659 0.985139953 0.74684306 -1.062341672
#> effect_72 -1.43127702 1.997843210 -0.53776912 -0.211221599
#> effect_73 1.11237278 -1.516223033 -0.14171665 1.137310748
#> effect_74 1.04874979 0.569161919 1.44058189 -2.001449623
#> effect_75 -0.74074388 0.814951557 -0.62295312 0.275362091
#> effect_76 -1.75489291 -0.972178452 -0.50273193 1.905480242
#> effect_77 -0.36003722 -0.421646942 0.39661826 0.022756485
#> effect_78 -0.20134167 1.766823996 -0.39048725 -0.869696478
#> effect_79 0.38692025 0.431421608 -2.38274438 1.965368360
#> effect_80 -1.04677187 -0.371681003 -0.42414378 1.514880412
#> effect_81 0.21793638 -0.280958414 -0.42016793 1.201710448
#> effect_82 0.98671461 0.920475748 0.55561868 -1.073603647
#> effect_83 -0.66240055 1.573858214 -0.41548108 0.688583838
#> effect_84 -3.36834059 2.051012475 -1.29267981 1.983666705
#> effect_85 2.82343785 -2.447642996 -1.74589937 0.607754576
#> effect_86 0.63055163 -0.456127426 0.10485105 -2.847573540
#> effect_87 0.24482791 -1.261343677 1.04809276 1.044536446
#> effect_88 0.17359977 0.124675554 1.08044437 -1.592406864
#> effect_89 0.05962431 -1.603512322 1.07073723 -0.155058915
#> effect_90 0.17125524 -0.231264931 1.31368649 0.607086145
#> effect_91 1.56986544 -0.565445553 1.39327610 0.426915674
#> effect_92 0.94452792 -0.793921018 0.28852327 -1.724706249
#> effect_93 -0.02515383 1.053702785 -0.45792498 0.255421956
#> effect_94 1.14814874 -0.944679082 -0.20445397 -0.968431796
#> effect_95 -0.48608395 -0.544993909 -0.29710895 -0.272010226
#> effect_96 0.54470501 0.591977359 0.90410725 -2.134588262
#> effect_97 -0.59743985 0.592766609 0.57246122 0.168639528
#> effect_98 -3.13227667 -0.910992764 0.22581345 1.535625491
#> effect_99 -2.54736018 1.109108155 -0.81308479 1.817991911
#> effect_100 0.43183664 -0.240423765 0.34705159 -0.366161685
#> effect_101 -0.52413718 0.724108589 -0.69116554 0.370815572
#> effect_102 -1.75561612 1.599710302 0.78702284 -0.142061305
#> effect_103 -2.62277116 -0.099884098 -0.08789254 0.766694984
#> effect_104 0.60768361 0.417764322 1.58334639 -1.388645645
#> effect_105 -0.63352975 -0.350031127 -0.84339085 1.357144143
#> effect_106 -0.70745581 0.616065937 -0.01389634 0.700362277
#> effect_107 0.64758188 1.054706463 -1.67415816 0.199168872
#> effect_108 0.60241477 0.040833320 0.17147850 -0.394514820
#> effect_109 -0.10198296 -1.769678561 0.34039898 0.910979804
#> effect_110 -0.54588572 0.556956940 0.34449146 -0.453634498
#> effect_111 -0.14426336 -0.090661682 1.03550216 -0.976245615
#> effect_112 1.32633903 -0.711643632 0.29558351 -0.654858535
#> effect_113 0.80179170 -0.258353145 0.15163993 0.832111703
#> effect_114 -0.40209236 -0.311038460 1.02555173 -0.364809193
#> effect_115 -1.16261974 -1.109047519 0.66024386 1.638782548
#> effect_116 1.33321318 -1.568244390 0.01376441 -0.463689826
#> effect_117 -0.58859824 0.905303626 1.54856608 -1.565939139
#> effect_118 0.63191951 -0.503645609 1.42349545 -1.604193576
#> effect_119 0.77973404 -0.729950884 0.60431483 0.207782084
#> effect_120 -0.00645734 0.147102976 0.34743982 -1.162786164
#> effect_121 -0.85482241 -1.288052643 0.17683447 0.650550354
#> effect_122 -2.25007692 0.802267877 1.11217133 -0.403059720
#> effect_123 0.68577099 -1.041878714 -0.29000994 -1.321690071
#> effect_124 0.10438776 -1.171602171 0.72305054 -0.686287921
#> effect_125 -1.13493050 0.869951644 1.36525284 -1.258170369
#> effect_126 0.36448209 -1.157727705 0.43153603 -0.359886828
#> effect_127 1.33977694 0.740503940 -0.73721583 -0.357066705
#> effect_128 -0.19818625 0.991328547 0.37153001 -0.345102077
#> effect_129 -1.94771136 0.834066221 1.46703401 0.640121654
#> effect_130 -0.74823506 -0.516784154 -0.34980408 -0.228038326
#> effect_131 -0.42815140 0.600723311 1.60991053 1.013720664
#> effect_132 0.55288539 0.085291782 -1.47271357 -0.016637082
#> effect_133 -0.58109468 -0.209533523 -0.41442307 0.909089634
#> effect_134 -0.43251892 0.148991186 0.27556930 0.085622508
#> effect_135 -0.99885225 0.402219812 -0.92502342 -0.234674499
#> effect_136 -2.49029683 1.553543993 -0.02251533 0.042376203
#> effect_137 0.57037309 -0.729565186 -1.43600081 1.387772331
#> effect_138 -0.16420132 0.558207149 -0.16850738 -0.731494294
#> effect_139 -0.08266775 0.012668459 -0.17459515 0.951331972
#> effect_140 -0.99966188 -0.023151268 -0.35585508 0.551850458
#> effect_141 0.53978265 -1.179063376 0.39763543 0.392830141
#> effect_142 -0.29649711 0.576602367 -1.19697580 -0.277359627
#> effect_143 1.12174166 -0.584043457 -0.47883460 -0.472324514
#> effect_144 1.50219669 -0.716598144 -1.20146890 0.033764430
#> effect_145 2.02962884 -0.124105177 -1.11853043 -1.870107369
#> effect_146 -0.67450813 0.314333715 0.36025630 0.488683605
#> effect_147 2.37492849 -0.947036215 -0.73845301 -0.554762800
#> effect_148 -0.30982311 -0.624574930 0.23911141 0.534846981
#> effect_149 0.34406101 0.959305270 0.03666553 0.123300976
#> effect_150 0.79507090 -0.112874955 0.34474075 -0.002675595
#> effect_151 -1.70654316 0.342582346 0.92696411 -0.211628704
#> effect_152 0.43267158 0.569708861 -0.37745559 0.558552681
#> effect_153 -0.68244064 -0.024670368 -0.72367396 1.623370664
#> effect_154 -0.03247963 -0.177427671 0.15618377 0.109861606
#> effect_155 -0.14217620 0.391294775 0.15375376 0.180177591
#> effect_156 0.67329171 -0.199206945 0.10280105 0.388218013
#> effect_157 -0.71391363 0.232474480 -1.22484651 0.175548996
#> effect_158 0.82665439 -0.101352762 -1.56433649 1.630942462
#> effect_159 0.67472142 -0.906390838 1.22871727 -0.812332773
#> effect_160 0.29078976 0.653331002 -0.91300363 -0.309335791
#> effect_161 -0.17532227 0.314139324 -0.86800170 -0.412537342
#> effect_162 0.86083413 -1.875658635 -1.22218873 0.852991220
#> effect_163 0.60646147 -1.528002196 -0.45216974 0.854962803
#> effect_164 0.79460890 0.353027861 -0.02430671 -1.048437576
#> effect_165 -0.72312746 -0.883983069 1.02178925 -0.179417967
#> effect_166 -0.81772153 0.998698097 0.96420729 -1.821413609
#> effect_167 -0.18004138 1.241786369 -0.67053293 -0.913876274
#> effect_168 -0.27291619 1.308102493 -0.37060825 -1.445350209
#> effect_169 -1.22667482 -0.295228817 -0.41346754 0.804572451
#> effect_170 0.68601986 -0.991282443 1.91755060 -1.440836309
#> effect_171 1.94549889 -1.207032403 -1.01903637 -0.575885565
#> effect_172 1.28726702 -0.649348920 -0.30885705 0.265452741
#> effect_173 -0.66346625 -0.808958002 0.33922405 1.002692248
#> effect_174 -0.15661311 -0.398475559 0.43097384 -0.231471653
#> effect_175 0.51967944 0.447851051 0.30638775 -0.653173050
#> effect_176 -1.20062308 -0.504676546 1.32383714 -1.058390762
#> effect_177 -1.30831178 -0.497053902 0.91473416 0.807343382
#> effect_178 0.90872115 0.036275315 -0.74024602 0.612885541
#> effect_179 0.34567893 0.754305130 -0.34597813 0.412963386
#> effect_180 0.40488044 1.017847389 0.08088572 -0.935819741
#> effect_181 -1.06014663 0.213322923 -0.45386799 1.191330778
#> effect_182 0.09181141 0.478840408 -0.13161746 -0.784222750
#> effect_183 0.99156611 -1.447637787 0.75229675 -0.270804675
#> effect_184 0.50608788 1.223211430 0.77531437 -1.479265285
#> effect_185 -0.08278051 0.477082563 0.26571376 -0.840006038
#> effect_186 1.14859495 -0.270126864 -0.77717121 0.652940602
#> effect_187 0.96189342 -0.245912663 -0.37625654 -0.068217569
#> effect_188 0.41482942 1.005868509 -0.64437789 0.004529797
#> effect_189 0.47144546 -0.623349540 0.15227382 -0.953264532
#> effect_190 0.54507398 0.568396772 -0.49692349 -0.886721384
#> effect_191 -1.21763277 -0.628272015 1.21944573 0.569622857
#> effect_192 0.67697271 -0.112338278 -0.19908558 -0.942814885
#> effect_193 -0.47429922 -0.379158629 0.81254050 -0.568324235
#> effect_194 -0.65210776 0.770624505 -0.12232956 -1.367132296
#> effect_195 -1.22767252 0.431587126 -0.05142670 1.063192912
#> effect_196 1.31469535 -0.755004099 1.07944236 -0.056824257
#> effect_197 0.34412139 0.392490762 -2.20163909 1.277117181
#> effect_198 0.82545084 -0.100808411 -0.92370179 0.130622472
#> effect_199 -0.52216417 0.711849031 -1.52688218 0.767921221
#> effect_200 -0.62390911 0.932090914 1.20662797 -1.246293370
#>
#> $Shat
#> [,1] [,2] [,3] [,4]
#> [1,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [2,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [3,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [4,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [5,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [6,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [7,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [8,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [9,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [10,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [11,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [12,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [13,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [14,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [15,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [16,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [17,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [18,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [19,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [20,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [21,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [22,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [23,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [24,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [25,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [26,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [27,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [28,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [29,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [30,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [31,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [32,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [33,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [34,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [35,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [36,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [37,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [38,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [39,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [40,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [41,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [42,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [43,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [44,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [45,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [46,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [47,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [48,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [49,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [50,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [51,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [52,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [53,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [54,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [55,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [56,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [57,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [58,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [59,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [60,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [61,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [62,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [63,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [64,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [65,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [66,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [67,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [68,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [69,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [70,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [71,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [72,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [73,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [74,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [75,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [76,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [77,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [78,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [79,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [80,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [81,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [82,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [83,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [84,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [85,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [86,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [87,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [88,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [89,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [90,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [91,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [92,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [93,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [94,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [95,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [96,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [97,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [98,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [99,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [100,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [101,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [102,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [103,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [104,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [105,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [106,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [107,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [108,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [109,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [110,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [111,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [112,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [113,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [114,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [115,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [116,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [117,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [118,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [119,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [120,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [121,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [122,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [123,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [124,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [125,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [126,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [127,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [128,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [129,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [130,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [131,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [132,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [133,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [134,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [135,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [136,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [137,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [138,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [139,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [140,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [141,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [142,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [143,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [144,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [145,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [146,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [147,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [148,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [149,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [150,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [151,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [152,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [153,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [154,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [155,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [156,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [157,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [158,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [159,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [160,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [161,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [162,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [163,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [164,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [165,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [166,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [167,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [168,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [169,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [170,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [171,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [172,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [173,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [174,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [175,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [176,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [177,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [178,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [179,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [180,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [181,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [182,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [183,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [184,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [185,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [186,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [187,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [188,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [189,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [190,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [191,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [192,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [193,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [194,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [195,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [196,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [197,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [198,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [199,] 0.8944272 0.8944272 0.8944272 0.8944272
#> [200,] 0.8944272 0.8944272 0.8944272 0.8944272
#>
#> $Shat_orig
#> condition_1 condition_2 condition_3 condition_4 condition_5
#> effect_1 1 1 1 1 1
#> effect_2 1 1 1 1 1
#> effect_3 1 1 1 1 1
#> effect_4 1 1 1 1 1
#> effect_5 1 1 1 1 1
#> effect_6 1 1 1 1 1
#> effect_7 1 1 1 1 1
#> effect_8 1 1 1 1 1
#> effect_9 1 1 1 1 1
#> effect_10 1 1 1 1 1
#> effect_11 1 1 1 1 1
#> effect_12 1 1 1 1 1
#> effect_13 1 1 1 1 1
#> effect_14 1 1 1 1 1
#> effect_15 1 1 1 1 1
#> effect_16 1 1 1 1 1
#> effect_17 1 1 1 1 1
#> effect_18 1 1 1 1 1
#> effect_19 1 1 1 1 1
#> effect_20 1 1 1 1 1
#> effect_21 1 1 1 1 1
#> effect_22 1 1 1 1 1
#> effect_23 1 1 1 1 1
#> effect_24 1 1 1 1 1
#> effect_25 1 1 1 1 1
#> effect_26 1 1 1 1 1
#> effect_27 1 1 1 1 1
#> effect_28 1 1 1 1 1
#> effect_29 1 1 1 1 1
#> effect_30 1 1 1 1 1
#> effect_31 1 1 1 1 1
#> effect_32 1 1 1 1 1
#> effect_33 1 1 1 1 1
#> effect_34 1 1 1 1 1
#> effect_35 1 1 1 1 1
#> effect_36 1 1 1 1 1
#> effect_37 1 1 1 1 1
#> effect_38 1 1 1 1 1
#> effect_39 1 1 1 1 1
#> effect_40 1 1 1 1 1
#> effect_41 1 1 1 1 1
#> effect_42 1 1 1 1 1
#> effect_43 1 1 1 1 1
#> effect_44 1 1 1 1 1
#> effect_45 1 1 1 1 1
#> effect_46 1 1 1 1 1
#> effect_47 1 1 1 1 1
#> effect_48 1 1 1 1 1
#> effect_49 1 1 1 1 1
#> effect_50 1 1 1 1 1
#> effect_51 1 1 1 1 1
#> effect_52 1 1 1 1 1
#> effect_53 1 1 1 1 1
#> effect_54 1 1 1 1 1
#> effect_55 1 1 1 1 1
#> effect_56 1 1 1 1 1
#> effect_57 1 1 1 1 1
#> effect_58 1 1 1 1 1
#> effect_59 1 1 1 1 1
#> effect_60 1 1 1 1 1
#> effect_61 1 1 1 1 1
#> effect_62 1 1 1 1 1
#> effect_63 1 1 1 1 1
#> effect_64 1 1 1 1 1
#> effect_65 1 1 1 1 1
#> effect_66 1 1 1 1 1
#> effect_67 1 1 1 1 1
#> effect_68 1 1 1 1 1
#> effect_69 1 1 1 1 1
#> effect_70 1 1 1 1 1
#> effect_71 1 1 1 1 1
#> effect_72 1 1 1 1 1
#> effect_73 1 1 1 1 1
#> effect_74 1 1 1 1 1
#> effect_75 1 1 1 1 1
#> effect_76 1 1 1 1 1
#> effect_77 1 1 1 1 1
#> effect_78 1 1 1 1 1
#> effect_79 1 1 1 1 1
#> effect_80 1 1 1 1 1
#> effect_81 1 1 1 1 1
#> effect_82 1 1 1 1 1
#> effect_83 1 1 1 1 1
#> effect_84 1 1 1 1 1
#> effect_85 1 1 1 1 1
#> effect_86 1 1 1 1 1
#> effect_87 1 1 1 1 1
#> effect_88 1 1 1 1 1
#> effect_89 1 1 1 1 1
#> effect_90 1 1 1 1 1
#> effect_91 1 1 1 1 1
#> effect_92 1 1 1 1 1
#> effect_93 1 1 1 1 1
#> effect_94 1 1 1 1 1
#> effect_95 1 1 1 1 1
#> effect_96 1 1 1 1 1
#> effect_97 1 1 1 1 1
#> effect_98 1 1 1 1 1
#> effect_99 1 1 1 1 1
#> effect_100 1 1 1 1 1
#> effect_101 1 1 1 1 1
#> effect_102 1 1 1 1 1
#> effect_103 1 1 1 1 1
#> effect_104 1 1 1 1 1
#> effect_105 1 1 1 1 1
#> effect_106 1 1 1 1 1
#> effect_107 1 1 1 1 1
#> effect_108 1 1 1 1 1
#> effect_109 1 1 1 1 1
#> effect_110 1 1 1 1 1
#> effect_111 1 1 1 1 1
#> effect_112 1 1 1 1 1
#> effect_113 1 1 1 1 1
#> effect_114 1 1 1 1 1
#> effect_115 1 1 1 1 1
#> effect_116 1 1 1 1 1
#> effect_117 1 1 1 1 1
#> effect_118 1 1 1 1 1
#> effect_119 1 1 1 1 1
#> effect_120 1 1 1 1 1
#> effect_121 1 1 1 1 1
#> effect_122 1 1 1 1 1
#> effect_123 1 1 1 1 1
#> effect_124 1 1 1 1 1
#> effect_125 1 1 1 1 1
#> effect_126 1 1 1 1 1
#> effect_127 1 1 1 1 1
#> effect_128 1 1 1 1 1
#> effect_129 1 1 1 1 1
#> effect_130 1 1 1 1 1
#> effect_131 1 1 1 1 1
#> effect_132 1 1 1 1 1
#> effect_133 1 1 1 1 1
#> effect_134 1 1 1 1 1
#> effect_135 1 1 1 1 1
#> effect_136 1 1 1 1 1
#> effect_137 1 1 1 1 1
#> effect_138 1 1 1 1 1
#> effect_139 1 1 1 1 1
#> effect_140 1 1 1 1 1
#> effect_141 1 1 1 1 1
#> effect_142 1 1 1 1 1
#> effect_143 1 1 1 1 1
#> effect_144 1 1 1 1 1
#> effect_145 1 1 1 1 1
#> effect_146 1 1 1 1 1
#> effect_147 1 1 1 1 1
#> effect_148 1 1 1 1 1
#> effect_149 1 1 1 1 1
#> effect_150 1 1 1 1 1
#> effect_151 1 1 1 1 1
#> effect_152 1 1 1 1 1
#> effect_153 1 1 1 1 1
#> effect_154 1 1 1 1 1
#> effect_155 1 1 1 1 1
#> effect_156 1 1 1 1 1
#> effect_157 1 1 1 1 1
#> effect_158 1 1 1 1 1
#> effect_159 1 1 1 1 1
#> effect_160 1 1 1 1 1
#> effect_161 1 1 1 1 1
#> effect_162 1 1 1 1 1
#> effect_163 1 1 1 1 1
#> effect_164 1 1 1 1 1
#> effect_165 1 1 1 1 1
#> effect_166 1 1 1 1 1
#> effect_167 1 1 1 1 1
#> effect_168 1 1 1 1 1
#> effect_169 1 1 1 1 1
#> effect_170 1 1 1 1 1
#> effect_171 1 1 1 1 1
#> effect_172 1 1 1 1 1
#> effect_173 1 1 1 1 1
#> effect_174 1 1 1 1 1
#> effect_175 1 1 1 1 1
#> effect_176 1 1 1 1 1
#> effect_177 1 1 1 1 1
#> effect_178 1 1 1 1 1
#> effect_179 1 1 1 1 1
#> effect_180 1 1 1 1 1
#> effect_181 1 1 1 1 1
#> effect_182 1 1 1 1 1
#> effect_183 1 1 1 1 1
#> effect_184 1 1 1 1 1
#> effect_185 1 1 1 1 1
#> effect_186 1 1 1 1 1
#> effect_187 1 1 1 1 1
#> effect_188 1 1 1 1 1
#> effect_189 1 1 1 1 1
#> effect_190 1 1 1 1 1
#> effect_191 1 1 1 1 1
#> effect_192 1 1 1 1 1
#> effect_193 1 1 1 1 1
#> effect_194 1 1 1 1 1
#> effect_195 1 1 1 1 1
#> effect_196 1 1 1 1 1
#> effect_197 1 1 1 1 1
#> effect_198 1 1 1 1 1
#> effect_199 1 1 1 1 1
#> effect_200 1 1 1 1 1
#>
#> $Shat_alpha
#> [,1] [,2] [,3] [,4]
#> [1,] 1 1 1 1
#> [2,] 1 1 1 1
#> [3,] 1 1 1 1
#> [4,] 1 1 1 1
#> [5,] 1 1 1 1
#> [6,] 1 1 1 1
#> [7,] 1 1 1 1
#> [8,] 1 1 1 1
#> [9,] 1 1 1 1
#> [10,] 1 1 1 1
#> [11,] 1 1 1 1
#> [12,] 1 1 1 1
#> [13,] 1 1 1 1
#> [14,] 1 1 1 1
#> [15,] 1 1 1 1
#> [16,] 1 1 1 1
#> [17,] 1 1 1 1
#> [18,] 1 1 1 1
#> [19,] 1 1 1 1
#> [20,] 1 1 1 1
#> [21,] 1 1 1 1
#> [22,] 1 1 1 1
#> [23,] 1 1 1 1
#> [24,] 1 1 1 1
#> [25,] 1 1 1 1
#> [26,] 1 1 1 1
#> [27,] 1 1 1 1
#> [28,] 1 1 1 1
#> [29,] 1 1 1 1
#> [30,] 1 1 1 1
#> [31,] 1 1 1 1
#> [32,] 1 1 1 1
#> [33,] 1 1 1 1
#> [34,] 1 1 1 1
#> [35,] 1 1 1 1
#> [36,] 1 1 1 1
#> [37,] 1 1 1 1
#> [38,] 1 1 1 1
#> [39,] 1 1 1 1
#> [40,] 1 1 1 1
#> [41,] 1 1 1 1
#> [42,] 1 1 1 1
#> [43,] 1 1 1 1
#> [44,] 1 1 1 1
#> [45,] 1 1 1 1
#> [46,] 1 1 1 1
#> [47,] 1 1 1 1
#> [48,] 1 1 1 1
#> [49,] 1 1 1 1
#> [50,] 1 1 1 1
#> [51,] 1 1 1 1
#> [52,] 1 1 1 1
#> [53,] 1 1 1 1
#> [54,] 1 1 1 1
#> [55,] 1 1 1 1
#> [56,] 1 1 1 1
#> [57,] 1 1 1 1
#> [58,] 1 1 1 1
#> [59,] 1 1 1 1
#> [60,] 1 1 1 1
#> [61,] 1 1 1 1
#> [62,] 1 1 1 1
#> [63,] 1 1 1 1
#> [64,] 1 1 1 1
#> [65,] 1 1 1 1
#> [66,] 1 1 1 1
#> [67,] 1 1 1 1
#> [68,] 1 1 1 1
#> [69,] 1 1 1 1
#> [70,] 1 1 1 1
#> [71,] 1 1 1 1
#> [72,] 1 1 1 1
#> [73,] 1 1 1 1
#> [74,] 1 1 1 1
#> [75,] 1 1 1 1
#> [76,] 1 1 1 1
#> [77,] 1 1 1 1
#> [78,] 1 1 1 1
#> [79,] 1 1 1 1
#> [80,] 1 1 1 1
#> [81,] 1 1 1 1
#> [82,] 1 1 1 1
#> [83,] 1 1 1 1
#> [84,] 1 1 1 1
#> [85,] 1 1 1 1
#> [86,] 1 1 1 1
#> [87,] 1 1 1 1
#> [88,] 1 1 1 1
#> [89,] 1 1 1 1
#> [90,] 1 1 1 1
#> [91,] 1 1 1 1
#> [92,] 1 1 1 1
#> [93,] 1 1 1 1
#> [94,] 1 1 1 1
#> [95,] 1 1 1 1
#> [96,] 1 1 1 1
#> [97,] 1 1 1 1
#> [98,] 1 1 1 1
#> [99,] 1 1 1 1
#> [100,] 1 1 1 1
#> [101,] 1 1 1 1
#> [102,] 1 1 1 1
#> [103,] 1 1 1 1
#> [104,] 1 1 1 1
#> [105,] 1 1 1 1
#> [106,] 1 1 1 1
#> [107,] 1 1 1 1
#> [108,] 1 1 1 1
#> [109,] 1 1 1 1
#> [110,] 1 1 1 1
#> [111,] 1 1 1 1
#> [112,] 1 1 1 1
#> [113,] 1 1 1 1
#> [114,] 1 1 1 1
#> [115,] 1 1 1 1
#> [116,] 1 1 1 1
#> [117,] 1 1 1 1
#> [118,] 1 1 1 1
#> [119,] 1 1 1 1
#> [120,] 1 1 1 1
#> [121,] 1 1 1 1
#> [122,] 1 1 1 1
#> [123,] 1 1 1 1
#> [124,] 1 1 1 1
#> [125,] 1 1 1 1
#> [126,] 1 1 1 1
#> [127,] 1 1 1 1
#> [128,] 1 1 1 1
#> [129,] 1 1 1 1
#> [130,] 1 1 1 1
#> [131,] 1 1 1 1
#> [132,] 1 1 1 1
#> [133,] 1 1 1 1
#> [134,] 1 1 1 1
#> [135,] 1 1 1 1
#> [136,] 1 1 1 1
#> [137,] 1 1 1 1
#> [138,] 1 1 1 1
#> [139,] 1 1 1 1
#> [140,] 1 1 1 1
#> [141,] 1 1 1 1
#> [142,] 1 1 1 1
#> [143,] 1 1 1 1
#> [144,] 1 1 1 1
#> [145,] 1 1 1 1
#> [146,] 1 1 1 1
#> [147,] 1 1 1 1
#> [148,] 1 1 1 1
#> [149,] 1 1 1 1
#> [150,] 1 1 1 1
#> [151,] 1 1 1 1
#> [152,] 1 1 1 1
#> [153,] 1 1 1 1
#> [154,] 1 1 1 1
#> [155,] 1 1 1 1
#> [156,] 1 1 1 1
#> [157,] 1 1 1 1
#> [158,] 1 1 1 1
#> [159,] 1 1 1 1
#> [160,] 1 1 1 1
#> [161,] 1 1 1 1
#> [162,] 1 1 1 1
#> [163,] 1 1 1 1
#> [164,] 1 1 1 1
#> [165,] 1 1 1 1
#> [166,] 1 1 1 1
#> [167,] 1 1 1 1
#> [168,] 1 1 1 1
#> [169,] 1 1 1 1
#> [170,] 1 1 1 1
#> [171,] 1 1 1 1
#> [172,] 1 1 1 1
#> [173,] 1 1 1 1
#> [174,] 1 1 1 1
#> [175,] 1 1 1 1
#> [176,] 1 1 1 1
#> [177,] 1 1 1 1
#> [178,] 1 1 1 1
#> [179,] 1 1 1 1
#> [180,] 1 1 1 1
#> [181,] 1 1 1 1
#> [182,] 1 1 1 1
#> [183,] 1 1 1 1
#> [184,] 1 1 1 1
#> [185,] 1 1 1 1
#> [186,] 1 1 1 1
#> [187,] 1 1 1 1
#> [188,] 1 1 1 1
#> [189,] 1 1 1 1
#> [190,] 1 1 1 1
#> [191,] 1 1 1 1
#> [192,] 1 1 1 1
#> [193,] 1 1 1 1
#> [194,] 1 1 1 1
#> [195,] 1 1 1 1
#> [196,] 1 1 1 1
#> [197,] 1 1 1 1
#> [198,] 1 1 1 1
#> [199,] 1 1 1 1
#> [200,] 1 1 1 1
#>
#> $V
#> [,1] [,2] [,3] [,4] [,5]
#> [1,] 1 0 0 0 0
#> [2,] 0 1 0 0 0
#> [3,] 0 0 1 0 0
#> [4,] 0 0 0 1 0
#> [5,] 0 0 0 0 1
#>
#> $commonV
#> [1] TRUE
#>
#> $alpha
#> [1] 0
#>
#> $L
#> condition_1 condition_2 condition_3 condition_4 condition_5
#> condition_1-mean 0.8 -0.2 -0.2 -0.2 -0.2
#> condition_2-mean -0.2 0.8 -0.2 -0.2 -0.2
#> condition_3-mean -0.2 -0.2 0.8 -0.2 -0.2
#> condition_4-mean -0.2 -0.2 -0.2 0.8 -0.2
#> attr(,"reference")
#> [1] "mean"
#>
#> $LSVSLt
#> condition_1-mean condition_2-mean condition_3-mean
#> condition_1-mean 1.00 -0.25 -0.25
#> condition_2-mean -0.25 1.00 -0.25
#> condition_3-mean -0.25 -0.25 1.00
#> condition_4-mean -0.25 -0.25 -0.25
#> condition_4-mean
#> condition_1-mean -0.25
#> condition_2-mean -0.25
#> condition_3-mean -0.25
#> condition_4-mean 1.00
#>
#> attr(,"class")
#> [1] "mash"