Plot specific effect from susiF object

Plot specific effect from susiF object

plot_effect_susiF(
  obj,
  effect = 1,
  title = "",
  cred.band = TRUE,
  lfsr.curve = TRUE,
  size_line = 2,
  size_point = 4,
  pos_SNP,
  pip_only = FALSE,
  point_shape,
  ...
)

Arguments

obj

output of the susiF function

effect

the index of the effect to be plotted

title

character

cred.band

logical, if TRUE, plot credible bands if obj fitted with wavelets regression. Set as TRUE by default

lfsr.curve

logical, if TRUE, plot estimated lfsr of the effect at each base pair if obj fitted with HMM regression. Set as TRUE by default

size_line

numeric, width of the plotted lines

size_point

numeric, size of the point

pos_SNP

vector, containing the base pair of the SNPs

pip_only

logical, if TRUE only ouput the PIP plot

point_shape

vector, containing the shape of dots

...

Other arguments..